miRBase entry: tch-mir-181a-1

Stem-loop tch-mir-181a-1

Accession

MI0031122

Description

Tupaia chinensis tch-mir-181a-1 precursor miRNA

Gene family

MIPF0000007; mir-181

Sequence

AACAUUCAACGCUGUCGGUGAGUuuggaauuauaaucaaaaccaucgaccguugauuguac
.(((.((((((..(((((((.((((.((.......)).))))))))))))))))).)))..

Structure

-A   U      CU       A    g  au 
  ACA UCAACG  GUCGGUG GUuu ga  u
  ||| ||||||  ||||||| |||| ||  a
  ugu aguugc  cagcuac caaa cu  u
ca   u      --       -    a  aa

Annotation confidence Not enough data

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Genome context

KB320907.1: 1699302-1699362 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-181a-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tch-miR-181a-5p

Accession	MIMAT0036463
Description	Tupaia chinensis tch-miR-181a-5p mature miRNA
Sequence	1 - AACAUUCAACGCUGUCGGUGAGU - 23
Evidence	experimental Illumina [1]

References

PubMed ID: 24314655
microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
"Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
"Virology (2014) 448:247-254