miRBase entry: tch-mir-424

Stem-loop tch-mir-424


Accession
MI0031152
Description
Tupaia chinensis tch-mir-424 precursor miRNA
Gene family
MIPF0000164; mir-322


Sequence

CAGCAGCAAUUCAUGUUUUGAagugcuguaaaggguucaaaacgugaggcgcugcuaua
.((((((..(((((((((((((.(.((....)).))))))))))))))..))))))...

Structure
--C      AA             g g  g 
   AGCAGC  UUCAUGUUUUGAa u cu u
   ||||||  ||||||||||||| | ||  
   ucgucg  gagugcaaaacuu g ga a
aua      cg             - g  a 


Annotation confidence Not enough data
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Genome context
KB370352.1: 2048280-2048338 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from tch-mir-424
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tch-miR-424-5p

Accession MIMAT0036495
Description Tupaia chinensis tch-miR-424-5p mature miRNA
Sequence 1 - CAGCAGCAAUUCAUGUUUUGA - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24314655
    microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
    "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
    "Virology (2014) 448:247-254