miRBase entry: tch-mir-147b

Stem-loop tch-mir-147b


Accession
MI0031170
Description
Tupaia chinensis tch-mir-147b precursor miRNA
Gene family
MIPF0000105; mir-147


Sequence

aguggaaacacuucugcaccaacuagauuauggguaucaGUGUGCGGAAAUGCUUCUGCU
(((((((.((.((((((((..(((.(((.......)))))))))))))).)).)))))))

Structure
       a  c        ca   a   ua 
aguggaa ca uucugcac  acu gau  u
||||||| || ||||||||  ||| |||  g
UCGUCUU GU AAGGCGUG  UGa cua  g
       C  A        --   -   ug 


Annotation confidence Not enough data
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Genome context
KB369669.1: 1099427-1099486 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from tch-mir-147b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tch-miR-147b

Accession MIMAT0036512
Description Tupaia chinensis tch-miR-147b mature miRNA
Sequence 40 - GUGUGCGGAAAUGCUUCUGCU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24314655
    microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
    "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
    "Virology (2014) 448:247-254