miRBase entry: tch-mir-181c

Stem-loop tch-mir-181c

Accession

MI0031185

Description

Tupaia chinensis tch-mir-181c precursor miRNA

Gene family

MIPF0000007; mir-181

Sequence

AACAUUCAACCUGUCGGUGAGUuugagcagcucagacaaaccaccgaccguugaguggac
..((((((((..(((((((.(((((((...)))))))....))))))).))))))))...

Structure

-AA        CU       ---A       c 
   CAUUCAAC  GUCGGUG    GUuugag  
   ||||||||  |||||||    ||||||| a
   gugaguug  cagccac    cagacuc  
cag        -c       caaa       g

Annotation confidence Not enough data

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Genome context

KB358908.1: 1331252-1331311 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-181c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tch-miR-181c-5p

Accession	MIMAT0036526
Description	Tupaia chinensis tch-miR-181c-5p mature miRNA
Sequence	1 - AACAUUCAACCUGUCGGUGAGU - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 24314655
microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
"Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
"Virology (2014) 448:247-254