miRBase entry: tch-mir-20a

Stem-loop tch-mir-20a


Accession
MI0031232
Description
Tupaia chinensis tch-mir-20a precursor miRNA
Gene family
MIPF0000001; mir-17


Sequence

UAAAGUGCUUAUAGUGCAGGUAguguuuaguuaucuacugcauuaugagcacuuaaagu
..(((((((((((((((((.(((...........)))))))))))))))))))).....

Structure
---UA                 G   uguu 
     AAGUGCUUAUAGUGCAG UAg    u
     ||||||||||||||||| |||    a
     uucacgaguauuacguc auc    g
ugaaa                 -   uauu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB320410.1: 3473624-3473682 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from tch-mir-20a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tch-miR-20a-5p

Accession MIMAT0036569
Description Tupaia chinensis tch-miR-20a-5p mature miRNA
Sequence 1 - UAAAGUGCUUAUAGUGCAGGUA - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24314655
    microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
    "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
    "Virology (2014) 448:247-254