Stem-loop tch-mir-93

Accession

MI0031290

Description

Tupaia chinensis tch-mir-93 precursor miRNA

Gene family

MIPF0000001; mir-17

Sequence

CAAAGUGCUGUUCGUGCAGGUAGugugauuaccugaccuacugcugagcuagcacuucccga
..((((((((((((.((((.(((.((.(.....).)))))))))))))).))))))).....

Structure

---CA       -     U    G   u  g u 
     AAGUGCU GUUCG GCAG UAG gu a u
     ||||||| ||||| |||| ||| || | a
     uucacga cgagu cguc auc ca u c
agccc       u     -    -   -  g c 

Annotation confidence Not enough data

Genome context

KB320709.1: 105392-105453 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-93

Mature tch-miR-93-5p

• Accession: MIMAT0036617
• Description: Tupaia chinensis tch-miR-93-5p mature miRNA
• Sequence: 1 - CAAAGUGCUGUUCGUGCAGGUAG - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254