miRBase entry: oha-mir-125b

Stem-loop oha-mir-125b


Accession
MI0031328
Description
Ophiophagus hannah oha-mir-125b precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

ggacuugcgccccucucugUCCCUGAGACCCUAACUUGUGACguuuugguuucaaguccACGGGUUAGGCUCUUGGGAGCUgugaguugugccccu
......((((..(((.(.((.(((((((.(((((((((((((.............)).))))))))))).))))))).)).).)))..))))....

Structure
ggacuu    cc   u u  C       C           -  guuuu 
      gcgc  cuc c gU CCUGAGA CCUAACUUGUG AC     g
      ||||  ||| | || ||||||| ||||||||||| ||     g
      cgug  gag g CG GGGUUCU GGAUUGGGCAc ug     u
--uccc    uu   u U  A       C           c  aacuu 


Annotation confidence Not enough data
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Genome context
AZIM01005224.1: 18951-19046 [+]

Database links

Mature oha-miR-125b-5p

Accession MIMAT0036674
Description Ophiophagus hannah oha-miR-125b-5p mature miRNA
Sequence 20 - UCCCUGAGACCCUAACUUGUGAC - 42
Evidence not_experimental

Mature oha-miR-125b-3p

Accession MIMAT0036675
Description Ophiophagus hannah oha-miR-125b-3p mature miRNA
Sequence 60 - ACGGGUUAGGCUCUUGGGAGCU - 81
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656