miRBase entry: oha-mir-146b

Stem-loop oha-mir-146b


Accession
MI0031359
Description
Ophiophagus hannah oha-mir-146b precursor miRNA
Gene family
MIPF0000103; mir-146


Sequence

uacauggcuggcuuagcucUGAGAACUGAAUUCCAUAGGCUUUagaagaaaugaaacGCCCCGUGGAUUCAGUUCUACagcuaggcagcuaauaaacuccagagagc
....((((((.(((((((...((((((((((.((((.(((((((.......))))..)))..))))))))))))))..))))))))))))).....(((....))).

Structure
------------uaca      g       cUG          U    -A   --    ga 
                uggcug cuuagcu   AGAACUGAAU CCAU  GGC  UUUa  a
                |||||| |||||||   |||||||||| ||||  |||  ||||  g
                aucgac ggaucga   UCUUGACUUA GGUG  CCG  aagu  a
cgagagaccucaaaua      -       -CA          -    CC   ca    aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
AZIM01000124.1: 99472-99578 [-]

Database links

Mature oha-miR-146b-5p

Accession MIMAT0036729
Description Ophiophagus hannah oha-miR-146b-5p mature miRNA
Sequence 20 - UGAGAACUGAAUUCCAUAGGCUUU - 43
Evidence not_experimental

Mature oha-miR-146b-3p

Accession MIMAT0036730
Description Ophiophagus hannah oha-miR-146b-3p mature miRNA
Sequence 58 - GCCCCGUGGAUUCAGUUCUAC - 78
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656