miRBase entry: oha-mir-147-1

Stem-loop oha-mir-147-1


Accession
MI0031360
Description
Ophiophagus hannah oha-mir-147-1 precursor miRNA
Gene family
MIPF0000105; mir-147


Sequence

cucugaaucuagUGGAAUCAUUUCUGCACAAACUAGaggauggaaaccaGUGUGCGGAAAUGCUUCUGCUACAuuuuua
....((((.((((((((.(((((((((((..(((.(.(........)))))))))))))))).)))))))).))))...

Structure
cucu    c        U           AA   A a gau 
    gaau uagUGGAA CAUUUCUGCAC  ACU G g   g
    |||| |||||||| |||||||||||  ||| | |    
    uuuA AUCGUCUU GUAAAGGCGUG  UGa c c   g
-auu    C        C           --   - - aaa 


Annotation confidence Not enough data
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Genome context
AZIM01002333.1: 95970-96048 [+]

Database links

Mature oha-miR-147-5p

Accession MIMAT0036731
Description Ophiophagus hannah oha-miR-147-5p mature miRNA
Sequence 13 - UGGAAUCAUUUCUGCACAAACUAG - 36
Evidence not_experimental

Mature oha-miR-147-3p

Accession MIMAT0036732
Description Ophiophagus hannah oha-miR-147-3p mature miRNA
Sequence 50 - GUGUGCGGAAAUGCUUCUGCUACA - 73
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656