miRBase entry: oha-mir-190b

Stem-loop oha-mir-190b


Accession
MI0031385
Description
Ophiophagus hannah oha-mir-190b precursor miRNA
Gene family
MIPF0000076; mir-190


Sequence

ccgcuccccagccucuguuUGAUAUGUUUGAUAUUAGGUUGuucuacugcaaaauccaACUAAAUAUCAAACAUAUUCugauagcggccgggaugg
(((.((((..(((.(((((.(((((((((((((((.(((((...............))))).)))))))))))))))..))))).))).)))))))

Structure
   c    ca   u     -U               A     uucuac 
ccg uccc  gcc cuguu  GAUAUGUUUGAUAUU GGUUG      u
||| ||||  ||| |||||  ||||||||||||||| |||||      g
ggu aggg  cgg gauag  UUAUACAAACUAUAA UCAac      c
   -    -c   c     uC               A     cuaaaa 


Annotation confidence Not enough data
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Genome context
AZIM01047643.1: 535-630 [+]

Database links

Mature oha-miR-190b-5p

Accession MIMAT0036775
Description Ophiophagus hannah oha-miR-190b-5p mature miRNA
Sequence 20 - UGAUAUGUUUGAUAUUAGGUUG - 41
Evidence not_experimental

Mature oha-miR-190b-3p

Accession MIMAT0036776
Description Ophiophagus hannah oha-miR-190b-3p mature miRNA
Sequence 59 - ACUAAAUAUCAAACAUAUUC - 78
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656