miRBase entry: oha-mir-196b

Stem-loop oha-mir-196b


Accession
MI0031390
Description
Ophiophagus hannah oha-mir-196b precursor miRNA
Gene family
MIPF0000031; mir-196


Sequence

uuaugcagcuguuccgugguuUAGGUAGUUUCAUGUUGUUGGGguuggcuuuuaacUCGGCAACAAGAAACUGCCUUAauuacgucaguuagucuucaucaagggcaaca
......(((((...(((((((.((((((((((.((((((((((............)))))))))).)))))))))).))))))).))))).(((((.....)))))....

Structure
--------------uuaugc     uuc       U          A          guugg 
                    agcug   cgugguu AGGUAGUUUC UGUUGUUGGG     c
                    |||||   ||||||| |||||||||| ||||||||||      
                    uugac   gcauuaA UCCGUCAAAG ACAACGGCUc     u
acaacgggaacuacuucuga     --u       U          A          aauuu 


Annotation confidence Not enough data
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Genome context
AZIM01001075.1: 39279-39388 [+]

Database links

Mature oha-miR-196b-5p

Accession MIMAT0036785
Description Ophiophagus hannah oha-miR-196b-5p mature miRNA
Sequence 22 - UAGGUAGUUUCAUGUUGUUGGG - 43
Evidence not_experimental

Mature oha-miR-196b-3p

Accession MIMAT0036786
Description Ophiophagus hannah oha-miR-196b-3p mature miRNA
Sequence 57 - UCGGCAACAAGAAACUGCCUUA - 78
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656