miRBase entry: oha-mir-199a

Stem-loop oha-mir-199a


Accession
MI0031392
Description
Ophiophagus hannah oha-mir-199a precursor miRNA
Gene family
MIPF0000040; mir-199


Sequence

ucugCCCAGUGUUCGGACUACCUGUUCaggacuacgagauuguACAGUAGUCUGCACAUUGGUUAggcugggc
.(((.(((((((.((((((((.(((.(((..........))).))))))))))).))))))).))).......

Structure
------u   C       U        C   U   gacu 
       cug CCAGUGU CGGACUAC UGU Cag    a
       ||| ||||||| |||||||| ||| |||     
       gAU GGUUACA GUCUGAUG ACA guu    c
cgggucg   U       C        -   u   agag 


Annotation confidence Not enough data
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Genome context
AZIM01003287.1: 39727-39799 [-]

Database links

Mature oha-miR-199a-5p

Accession MIMAT0036789
Description Ophiophagus hannah oha-miR-199a-5p mature miRNA
Sequence 5 - CCCAGUGUUCGGACUACCUGUUC - 27
Evidence not_experimental

Mature oha-miR-199a-3p

Accession MIMAT0036790
Description Ophiophagus hannah oha-miR-199a-3p mature miRNA
Sequence 44 - ACAGUAGUCUGCACAUUGGUUA - 65
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656