miRBase entry: oha-mir-1b

Stem-loop oha-mir-1b


Accession
MI0031397
Description
Ophiophagus hannah oha-mir-1b precursor miRNA
Gene family
MIPF0000038; mir-1


Sequence

aaugACAUACUUCUUUAUAUGCCCAUAugaaccuggccaacuaUGGAAUGUAAAGAAGUAUGUAUuucaggcacgga
....((((((((((((((((..(((((((........))..))))).))))))))))))))))..............

Structure
----------aaug                GC     --  aac 
              ACAUACUUCUUUAUAU  CCAUA  ug   c
              ||||||||||||||||  |||||  ||    
              UGUAUGAAGAAAUGUA  GGUau  ac   u
aggcacggacuuUA                -A     ca  cgg 


Annotation confidence Not enough data
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Genome context
AZIM01003801.1: 26787-26863 [-]

Database links

Mature oha-miR-1b-5p

Accession MIMAT0036799
Description Ophiophagus hannah oha-miR-1b-5p mature miRNA
Sequence 5 - ACAUACUUCUUUAUAUGCCCAUA - 27
Evidence not_experimental

Mature oha-miR-1b-3p

Accession MIMAT0036800
Description Ophiophagus hannah oha-miR-1b-3p mature miRNA
Sequence 44 - UGGAAUGUAAAGAAGUAUGUAU - 65
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656