miRBase entry: oha-mir-218-2

Stem-loop oha-mir-218-2


Accession
MI0031420
Description
Ophiophagus hannah oha-mir-218-2 precursor miRNA
Gene family
MIPF0000026; mir-218


Sequence

gggauuuuccuUUGUGCUUGAUCUAACCAUGUGguagaacaauacaaauugaacAUGGUUCUGUCAAGCACCAUGGaaggcuccaugcuuuccugcagcau
.(((((((((...(((((((((..((((((((....................))))))))..)))))))))...)))))).)))(((((.......)))))

Structure
----------------g   -      uUU         CU        Gguagaaca 
                 gga uuuucc   GUGCUUGAU  AACCAUGU         a
                 ||| ||||||   |||||||||  ||||||||          
                 ccu ggaaGG   CACGAACUG  UUGGUAca         u
uacgacguccuuucgua   c      UAC         UC        aguuaaaca 


Annotation confidence Not enough data
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Genome context
AZIM01000153.1: 403906-404006 [+]

Database links

Mature oha-miR-218-5p

Accession MIMAT0036836
Description Ophiophagus hannah oha-miR-218-5p mature miRNA
Sequence 12 - UUGUGCUUGAUCUAACCAUGUG - 33
Evidence not_experimental

Mature oha-miR-218-2-3p

Accession MIMAT0036838
Description Ophiophagus hannah oha-miR-218-2-3p mature miRNA
Sequence 55 - AUGGUUCUGUCAAGCACCAUGG - 76
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656