miRBase entry: oha-mir-458

Stem-loop oha-mir-458


Accession
MI0031475
Description
Ophiophagus hannah oha-mir-458 precursor miRNA
Gene family
MIPF0000179; mir-458


Sequence

ucguggugcagauggcAGCGCCAUUUUCAGAGCUAUAaacaguaucauugucAUAGCUCUUUGAAUGGUACUGCcguauguacugaa
....((((((.(((((((.(((((((..((((((((..(((((...))))).))))))))..))))))).))))))).))))))...

Structure
ucgu      g       C       UC        Aa     a 
    ggugca auggcAG GCCAUUU  AGAGCUAU  acagu  
    |||||| ||||||| |||||||  ||||||||  ||||| u
    ucaugu ugcCGUC UGGUAAG  UCUCGAUA  uguua  
-aag      a       A       UU        -c     c 


Annotation confidence Not enough data
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Genome context
AZIM01004436.1: 40502-40588 [+]

Database links

Mature oha-miR-458-5p

Accession MIMAT0036934
Description Ophiophagus hannah oha-miR-458-5p mature miRNA
Sequence 17 - AGCGCCAUUUUCAGAGCUAUA - 37
Evidence not_experimental

Mature oha-miR-458-3p

Accession MIMAT0036935
Description Ophiophagus hannah oha-miR-458-3p mature miRNA
Sequence 53 - AUAGCUCUUUGAAUGGUACUGC - 74
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656