miRBase entry: tae-MIR9780

Stem-loop tae-MIR9780


Accession
MI0031536
Description
Triticum aestivum tae-MIR9780 precursor miRNA


Sequence

72 reads, 15 reads per million, 67 experiments
cgccgugguggccgaggaugcaaggcgugggggagcuggccaaggcgugcaccaccaucaucuggauCGGGUCGGCGCUGCACGCGGCg
(((((((((((((((.(((.((.((.((((((..((..((....))..)).)).))).).)))).)))...))))).).)).)))))))

Structure
       -  - -     --g   g  a  c -   -  ga  ug  c 
cgccgug gu g gccga   gau ca gg g ugg gg  gc  gc a
||||||| || | |||||   ||| || || | ||| ||  ||  ||  
gCGGCGC CG C CGGCU   Cua gu cu c acc cc  cg  cg a
       A  U G     GGG   g  -  a u   a  -a  ug  g 


Annotation confidence Not enough data
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Comments
This sequence was incorrectly named MIR2019 in [1].

Genome context
Unknown

Database links

Mature tae-miR9780

Accession MIMAT0036994
Description Triticum aestivum tae-miR9780 mature miRNA
Sequence 68 - CGGGUCGGCGCUGCACGCGGC - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19499258
    Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in bread wheat (Triticum aestivum L.) and Brachypodium distachyon (L.) Beauv
    "Wei B, Cai T, Zhang R, Li A, Huo N, Li S, Gu YQ, Vogel J, Jia J, Qi Y, Mao L"
    "Funct Integr Genomics (2009) 9:499-511