miRBase entry: ssc-mir-7857

Stem-loop ssc-mir-7857


Accession
MI0031552
Description
Sus scrofa ssc-mir-7857 precursor miRNA
Gene family
MIPF0002001; mir-7857


Sequence

6 reads, 23 reads per million, 5 experiments
cuauugaagcauagccaguuugggaagaaugcuguuacccucaaggaagaaacuggAUUGUUCUCCAACCUGGCUCUUuaguuaccag
..(((((((...((((((.(((((((.(((.(.(((..((....))....))).).))).))).)))).)))))))))))))......

Structure
----cu       cau      u    -   g   g u   --ac  u 
      auugaag   agccag uugg gaa aau c guu    cc c
      |||||||   |||||| |||| ||| ||| | |||    ||  
      ugauUUC   UCGGUC AACC CUU UUA g caa    gg a
gaccau       ---      C    U   G   g u   agaa  a 


Annotation confidence Not enough data
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Genome context
chr7: 22962941-22963028 [+]

Database links

Mature ssc-miR-7857-3p

Accession MIMAT0037007
Description Sus scrofa ssc-miR-7857-3p mature miRNA
Sequence 57 - AUUGUUCUCCAACCUGGCUCUU - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100