miRBase entry: ssc-mir-9806-4

Stem-loop ssc-mir-9806-4


Accession
MI0031573
Description
Sus scrofa ssc-mir-9806-4 precursor miRNA
Gene family
MIPF0001914; mir-9806


Sequence

ugcuuucuuuCCUCGCUGAGUAGUCUGGACCcacguguggcaggcagauacggucuggccaggagccgaggcc
.(((((..(((((.(((((.(.(((((...(((....)))....)))))..).)).))).)))))..))))).

Structure
u     cu     C   -  G -A     -GAC   c 
 gcuuu  uuCCU GCU GA U  GUCUG    Cca g
 |||||  ||||| ||| || |  |||||    |||  
 cggag  gagga cgg cu g  uagac    ggu u
c     cc     c   u  g ca     ggac   g 


Annotation confidence Not enough data
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Genome context
chr9: 101343243-101343315 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ssc-mir-9806-4
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ssc-miR-9806-5p

Accession MIMAT0037024
Description Sus scrofa ssc-miR-9806-5p mature miRNA
Sequence 11 - CCUCGCUGAGUAGUCUGGACC - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100