miRBase entry: ssc-mir-9840

Stem-loop ssc-mir-9840


Accession
MI0031609
Description
Sus scrofa ssc-mir-9840 precursor miRNA


Sequence

cacgagauguccuuuucuuuuccucugggacagggccaaagggcccaucuucacaaacuggcUCUAGAGGAGAUCGUGGGGGAagcucuccca
...((((..((((((.(.(((((((((((.(((((((....)))))............))..)))))))))))..).))))))...))))...

Structure
cac    -ug      u -u           -a  ------------     a 
   gaga   uccuuu c  uuuccucuggg  ca            gggcc a
   ||||   |||||| |  |||||||||||  ||            |||||  
   cucu   AGGGGG G  AGAGGAGAUCU  gu            cccgg a
acc    cga      U CU           cg  caaacacuucua     g 


Annotation confidence Not enough data
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Genome context
chr8: 30929507-30929599 [-]

Database links

Mature ssc-miR-9840-3p

Accession MIMAT0037058
Description Sus scrofa ssc-miR-9840-3p mature miRNA
Sequence 63 - UCUAGAGGAGAUCGUGGGGGA - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100