miRBase entry: ssc-mir-9843

Stem-loop ssc-mir-9843


Accession
MI0031612
Description
Sus scrofa ssc-mir-9843 precursor miRNA

Literature search
1 open access papers mention ssc-mir-9843
(2 sentences)

Sequence

12 reads, 21 reads per million, 6 experiments
uacacagcuuuccagagguuuccagcuuauaggauauucauaugguaguUCUGUGAACUAGAAACCUCUGGaaaguggugu
.((((.((((((((((((((((.((.(((((((((..((....))..))))))))).)).)))))))))))))))).))))

Structure
u    a                c  c         au  a 
 acac gcuuuccagagguuuc ag uuauaggau  uc u
 |||| |||||||||||||||| || |||||||||  ||  
 ugug ugaaaGGUCUCCAAAG UC AGUGUCUug  gg a
-    g                A  A         au  u 


Annotation confidence Not enough data
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Genome context
chr8: 122371904-122371984 [-]

Database links

Mature ssc-miR-9843-3p

Accession MIMAT0037061
Description Sus scrofa ssc-miR-9843-3p mature miRNA
Sequence 50 - UCUGUGAACUAGAAACCUCUGG - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100