miRBase entry: ssc-mir-9846

Stem-loop ssc-mir-9846


Accession
MI0031621
Description
Sus scrofa ssc-mir-9846 precursor miRNA


Sequence

aggaccuggaaucaucugcccucguucacaggcagaaauuuugaaaacaaguuguucucgcccauccUGCCUGGAUCAGAGGAGGAAAacagauucau
.(((.(((......(((..((((..((.(((((((......(((.((((...)))).)))......)))))))))...)))).)))...))).)))..

Structure
-a   c   gaauca   gc    -gu  a       aaauuu   a    a 
  gga cug      ucu  ccuc   uc caggcag      uga aaca  
  ||| |||      |||  ||||   || |||||||      ||| |||| g
  cuu gac      AGG  GGAG   AG GUCCGUc      gcu uugu  
ua   a   ---aAA   -A    ACU  -       cuaccc   c    u 


Annotation confidence Not enough data
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Genome context
chr8: 144946100-144946197 [-]

Database links

Mature ssc-miR-9846-3p

Accession MIMAT0037065
Description Sus scrofa ssc-miR-9846-3p mature miRNA
Sequence 68 - UGCCUGGAUCAGAGGAGGAAA - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100