miRBase entry: ssc-mir-9852

Stem-loop ssc-mir-9852


Accession
MI0031628
Description
Sus scrofa ssc-mir-9852 precursor miRNA


Sequence

caucuccuuggcuucuuuucuuccagaaaccuccaccucccgccuccuuccgaccacauuagaaccUGGGAUCGGGAUCGUGGGACcaaauuugcu
.........((.((((........)))).))......((((((....((((((((.((........)))).))))))..))))))...........

Structure
caucuccuuggcuucuuuucuuccagaaaccuccacc      cucc      -  a  uua 
                                     ucccgc    uuccga cc ca   g
                                     ||||||    |||||| || ||    
                                     AGGGUG    AGGGCU GG GU   a
--------------------------ucguuuaaacC      --CU      A  -  cca 


Annotation confidence Not enough data
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Genome context
chr5: 49477033-49477128 [+]

Database links

Mature ssc-miR-9852-3p

Accession MIMAT0037071
Description Sus scrofa ssc-miR-9852-3p mature miRNA
Sequence 67 - UGGGAUCGGGAUCGUGGGAC - 86
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100