miRBase entry: ata-MIR5070

Stem-loop ata-MIR5070


Accession
MI0031651
Description
Aegilops tauschii ata-MIR5070 precursor miRNA
Gene family
MIPF0002013; MIR5070


Sequence

accuaaaggguaccuUCUGACCCUUCUUAGUUCAACcaaauaaacuaauuuuuccuaauuuaguucauucagUUGAACUAAGUAGGGUCGGAGgguacccugga
.((...((((((((((((((((((.(((((((((((..(((.((((((.((.....)).)))))).)))..))))))))))).)))))))))))))))))))).

Structure
a  uaa                  U           ca   a      u  u 
 cc   aggguaccuUCUGACCCU CUUAGUUCAAC  aau aacuaa uu u
 ||   |||||||||||||||||| |||||||||||  ||| |||||| || c
 gg   ucccauggGAGGCUGGGA GAAUCAAGUUg  uua uugauu aa c
a  ---                  U           ac   c      u  u 


Annotation confidence Not enough data
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Genome context
chr5: 1380924-1381027 [+]

Database links

Mature ata-miR5070-5p

Accession MIMAT0037098
Description Aegilops tauschii ata-miR5070-5p mature miRNA
Sequence 16 - UCUGACCCUUCUUAGUUCAAC - 36
Evidence experimental
Illumina [1]

Mature ata-miR5070-3p

Accession MIMAT0037099
Description Aegilops tauschii ata-miR5070-3p mature miRNA
Sequence 73 - UUGAACUAAGUAGGGUCGGAG - 93
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23535592
    Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
    "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
    "Nature (2013) 496:91-95