Stem-loop ata-MIR2275a

Accession

MI0031657

Description

Aegilops tauschii ata-MIR2275a precursor miRNA

Gene family

MIPF0000797; MIR2275

Sequence

gcacugaaagUGAGUGUUCGAGGAAAGCAAacuggaaaaauccaucucaaagugcugauguuuccagUUUGUUUUUCUCCAAUAUCUCAuuuucgguag
..((((((((((((((((.(((((((((((((((((((.((((((......)))..))).))))))))))))))))))).)))).))))))))))))..

Structure

gc            -    C                   a   --   cu 
  acugaaagUGAG UGUU GAGGAAAGCAAacuggaaa auc  cau  c
  |||||||||||| |||| ||||||||||||||||||| |||  |||   
  uggcuuuuACUC AUAA CUCUUUUUGUUUgaccuuu uag  gug  a
ga            U    C                   g   uc   aa 

Annotation confidence Not enough data

Genome context

chr1: 471468794-471468892 [+]

Mature ata-miR2275a-5p

• Accession: MIMAT0037110
• Description: Aegilops tauschii ata-miR2275a-5p mature miRNA
• Sequence: 11 - UGAGUGUUCGAGGAAAGCAA - 30
• Evidence: experimental ; Illumina [1]

Mature ata-miR2275a-3p

• Accession: MIMAT0037111
• Description: Aegilops tauschii ata-miR2275a-3p mature miRNA
• Sequence: 68 - UUUGUUUUUCUCCAAUAUCUCA - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95