Stem-loop ata-MIR9672

Accession

MI0031667

Description

Aegilops tauschii ata-MIR9672 precursor miRNA

Gene family

MIPF0001942; MIR9672

Sequence

gugaaggcgaugCUUAAUGACAGUCGUGGUGUCcuaggugaagacgaugcuuaauggccagcguagacagucgccuggcucuucuaggaUACCACGACUGUCAUUAAGCAucaucuucac
(((((((.((((((((((((((((((((((((((((((.((...............(((((((........)).))))))).)))))))))))))))))))))))))))))).)))))))

Structure

       c                              u  agacgaugcuuaaug     -  uag 
gugaagg gaugCUUAAUGACAGUCGUGGUGUCcuagg ga               gccag cg   a
||||||| |||||||||||||||||||||||||||||| ||               ||||| ||    
cacuucu cuACGAAUUACUGUCAGCACCAUaggaucu cu               cgguc gc   c
       a                              u  ---------------     c  uga 

Annotation confidence Not enough data

Genome context

chr5: 263653904-263654023 [-]

Mature ata-miR9672-5p

• Accession: MIMAT0037128
• Description: Aegilops tauschii ata-miR9672-5p mature miRNA
• Sequence: 13 - CUUAAUGACAGUCGUGGUGUC - 33
• Evidence: experimental ; Illumina [1]

Mature ata-miR9672-3p

• Accession: MIMAT0037129
• Description: Aegilops tauschii ata-miR9672-3p mature miRNA
• Sequence: 90 - UACCACGACUGUCAUUAAGCA - 110
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95