miRBase entry: ata-MIR395a

Stem-loop ata-MIR395a


Accession
MI0031684
Description
Aegilops tauschii ata-MIR395a precursor miRNA
Gene family
MIPF0000016; MIR395


Sequence

cucgucgggaGUUCCCUUCAAGCACUUCAGGaagcaucuuuuguagggcauuucUGAAGUGUUUGGGGGAACUCuuguugucac
.....((((((((((((.(((((((((((((((((.(((.....))))).))))))))))))))))))))))))))).......

Structure
--cucgu            U               -  a   u 
       cgggaGUUCCCU CAAGCACUUCAGGaa gc ucu u
       |||||||||||| ||||||||||||||| || ||| u
       guuCUCAAGGGG GUUUGUGAAGUcuuu cg gga g
cacuguu            -               a  -   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr2: 456759238-456759321 [-]

Database links

Mature ata-miR395a-5p

Accession MIMAT0037162
Description Aegilops tauschii ata-miR395a-5p mature miRNA
Sequence 11 - GUUCCCUUCAAGCACUUCAGG - 31
Evidence experimental
Illumina [1]

Mature ata-miR395a-3p

Accession MIMAT0037163
Description Aegilops tauschii ata-miR395a-3p mature miRNA
Sequence 55 - UGAAGUGUUUGGGGGAACUC - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23535592
    Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
    "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
    "Nature (2013) 496:91-95