Stem-loop sequence ata-MIR167f

Accession

MI0031701 (change log)

Description

Aegilops tauschii miR167f stem-loop

Gene family

MIPF0000023; MIR167_1

Literature search

1 open access papers mention ata-MIR167f
(12 sentences)

Stem-loop

   -u        c         c           cucauccagcaugcgccgaaaccgcguucgg 
5'   gugagaga ugaagcugc agcaugaucug                               u
     |||||||| ||||||||| |||||||||||                                
3'   cacucuuu acuucgacg ucguacuagac                               u
   gg        u         -           uaccucguuuuuaagguucuauuggggcgcg 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (ASM34733v2; GCA_000347335.2): chr6: 134463342-134463467 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0031701

Mature sequence ata-miR167f-5p

• Accession: MIMAT0037196
• Sequence: 11 - ugaagcugccagcaugaucugc - 32
• Evidence: experimental; Illumina [1]

Mature sequence ata-miR167f-3p

• Accession: MIMAT0037197
• Sequence: 96 - cagaucaugcugcagcuucau - 116
• Evidence: experimental; Illumina [1]

References

1. PMID:23535592 "Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation" Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu Nature. 496:91-95(2013).