miRBase entry: ata-MIR164a

Stem-loop ata-MIR164a


Accession
MI0031709
Description
Aegilops tauschii ata-MIR164a precursor miRNA
Gene family
MIPF0000045; MIR164


Sequence

cgaacggugcUGGAGAAGCAGGGCACGUGCUcgauccaucgacccaaagcgguugcagCACGUGCGCUCCUUCUCCAGCauggcuucuc
.((((.((((((((((((.((.((((((((((((((...(........).))))).))))))))).)).)))))))))))).).)))..

Structure
-c   - g            C  G         -     cau gac 
  gaa c gugcUGGAGAAG AG GCACGUGCU cgauc   c   c
  ||| | |||||||||||| || ||||||||| |||||   |    
  cuu g uaCGACCUCUUC UC CGUGCACga guugg   g   c
cu   c g            C  G         c     --c aaa 


Annotation confidence Not enough data
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Genome context
chr6: 334256766-334256854 [-]

Database links

Mature ata-miR164a-5p

Accession MIMAT0037212
Description Aegilops tauschii ata-miR164a-5p mature miRNA
Sequence 11 - UGGAGAAGCAGGGCACGUGCU - 31
Evidence experimental
Illumina [1]

Mature ata-miR164a-3p

Accession MIMAT0037213
Description Aegilops tauschii ata-miR164a-3p mature miRNA
Sequence 59 - CACGUGCGCUCCUUCUCCAGC - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23535592
    Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
    "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
    "Nature (2013) 496:91-95