Stem-loop sequence ata-MIR2118b

AccessionMI0031713 (change log)
DescriptionAegilops tauschii miR2118b stem-loop
Gene family MIPF0000745; MIR2118
Literature search

1 open access papers mention ata-MIR2118b
(1 sentences)

Stem-loop 
   g     u      -  g   cc            g       a ca   ----          c uuuc   u  ucaa      aau   -uaa   a   a     g 
5'  uuugg guuuuc cc aug  ucccauuccuau guucuug g  cuc    cuuccucuuc c    gcu gc    uagauu   uca    auc uaa uaugu u
    ||||| |||||| || |||  |||||||||||| ||||||| |  |||    |||||||||| |    ||| ||    ||||||   |||    ||| ||| |||||  
3'  aaauc caaagg gg uac  aggguaagggug cgagagc c  gag    gaaggagaag g    uga cg    aucuag   agu    uag auu auaca g
   g     c      a  -   -a            a       c ua   aaaa          a ---u   u  uaag      ---   cuaa   -   c     c
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM34733v2; GCA_000347335.2) Overlapping transcripts
chr2: 441266102-441266306 [+]
intergenic
Database links

Mature sequence ata-miR2118b-5p

Accession MIMAT0037220
Sequence

11 -  

uucccgaugccucccauuccua

 - 32

Get sequence
Evidence experimental; Illumina [1]

Mature sequence ata-miR2118b-3p

Accession MIMAT0037221
Sequence

176 -  

gggaaugggaacauggaggaa

 - 196

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:23535592 "Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation" Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu Nature. 496:91-95(2013).