Stem-loop ata-MIR9674b

Accession

MI0031731

Description

Aegilops tauschii ata-MIR9674b precursor miRNA

Gene family

MIPF0001917; MIR9674

Sequence

ggcggcugcugcugccccacgauggguaggauggccGGUGCUAUGGAUAGCUUCAACccgauguucgugccacaccgcguccgucgugagucaagcagggagccaauccucuggcUGAAUUUGUCCAUAGCAUCAGcaccggccgu
((((((....))))))((((.....)).))(((((((((((((((((((((((..((((((((..((((......))))..))))).).)).))))....(((((......))))).....)))))))......))))))))))))

Structure

ggcggcugcugcugccccacgauggguagg            ------       -------------------------    CA  - -     uu    cc 
                              auggccGGUGCU      AUGGAUA                         GCUU  AC c cgaug  cgug  a
                              ||||||||||||      |||||||                         ||||  || | |||||  ||||   
                              ugccggccacGA      UACCUGU                         cgaa  ug g gcugc  gcgc  c
------------------------------            CUACGA       UUAAGUcggucuccuaaccgaggga    -c  a u     cu    ca 

Annotation confidence Not enough data

Genome context

chr4: 409005913-409006058 [-]

Mature ata-miR9674b-5p

• Accession: MIMAT0037256
• Description: Aegilops tauschii ata-miR9674b-5p mature miRNA
• Sequence: 37 - GGUGCUAUGGAUAGCUUCAAC - 57
• Evidence: experimental ; Illumina [1]

Mature ata-miR9674b-3p

• Accession: MIMAT0037257
• Description: Aegilops tauschii ata-miR9674b-3p mature miRNA
• Sequence: 116 - UGAAUUUGUCCAUAGCAUCAG - 136
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95