Stem-loop ame-mir-2b

Accession

MI0031814

Description

Apis mellifera ame-mir-2b precursor miRNA

Gene family

MIPF0000049; mir-2

Literature search

4 open access papers mention ame-mir-2b
(10 sentences)

Sequence

gacgccacgcUCAUCAAAGCUGGCUGUGAUAUGAacgcucguaucagcauaucacaaccacuuugugagcggugcaca
...((..((((((.(((((.(((.(((((((((..............))))))))).))))))))))))))..))...

Structure

gac  ca      U     C   C         Aacgcu 
   gc  cgcUCA CAAAG UGG UGUGAUAUG      c
   ||  |||||| ||||| ||| |||||||||       
   cg  gcgagu guuuc acc acacuauac      g
aca  ug      -     -   a         gacuau 

Annotation confidence Not enough data

Genome context

CM000054.5: 1246930-1247007 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from ame-mir-2b

Mature ame-miR-2b-5p

• Accession: MIMAT0037292
• Description: Apis mellifera ame-miR-2b-5p mature miRNA
• Sequence: 11 - UCAUCAAAGCUGGCUGUGAUAUGA - 34
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 24136738
   The integrative analysis of microRNA and mRNA expression in Apis mellifera following maze-based visual pattern learning
   "Qin QH, Wang ZL, Tian LQ, Gan HY, Zhang SW, Zeng ZJ"
   "Insect Sci (2014) 21:619-636


2. PubMed ID: 22409512
   Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
   "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
   "Genes Brain Behav (2012) 11:660-670