miRBase entry: pal-mir-185

Stem-loop pal-mir-185


Accession
MI0032356
Description
Pteropus alecto pal-mir-185 precursor miRNA


Sequence

UGGAGAGAAAGGCAGUUCCUGAugguccccugcccAGGGGCUGGCUUUCCUCUGGU
.((((.(((((.(((((((((..(((.....)))))))))))).)))))))))...

Structure
--U    A     G         Au   c 
   GGAG GAAAG CAGUUCCUG  ggu c
   |||| ||||| |||||||||  ||| c
   UCUC CUUUC GUCGGGGAc  ccg c
UGG    -     G         --   u 


Annotation confidence Not enough data
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Genome context
KB030791.1: 4908992-4909047 [-]

Database links

Mature pal-miR-185-5p

Accession MIMAT0039840
Description Pteropus alecto pal-miR-185-5p mature miRNA
Sequence 1 - UGGAGAGAAAGGCAGUUCCUGA - 22
Evidence experimental
Illumina [1]

Mature pal-miR-185-3p

Accession MIMAT0039841
Description Pteropus alecto pal-miR-185-3p mature miRNA
Sequence 36 - AGGGGCUGGCUUUCCUCUGGU - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682