miRBase entry: pal-mir-28

Stem-loop pal-mir-28


Accession
MI0032385
Description
Pteropus alecto pal-mir-28 precursor miRNA


Sequence

AAGGAGCUCACAGUCUAUUGAguugcuuuucugacuuuccCACUAGAUUGUGAGCUCCUGGA
.((((((((((((((((.((((((........))))....)).))))))))))))))))...

Structure
--A                U  ----    gcu 
   AGGAGCUCACAGUCUA UG    Aguu   u
   |||||||||||||||| ||    ||||    
   UCCUCGAGUGUUAGAU AC    ucag   u
AGG                C  ccuu    ucu 


Annotation confidence Not enough data
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Genome context
KB031155.1: 6290599-6290660 [+]

Database links

Mature pal-miR-28-5p

Accession MIMAT0039890
Description Pteropus alecto pal-miR-28-5p mature miRNA
Sequence 1 - AAGGAGCUCACAGUCUAUUGA - 21
Evidence experimental
Illumina [1]

Mature pal-miR-28-3p

Accession MIMAT0039891
Description Pteropus alecto pal-miR-28-3p mature miRNA
Sequence 41 - CACUAGAUUGUGAGCUCCUGGA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682