miRBase entry: pal-mir-382

Stem-loop pal-mir-382


Accession
MI0032398
Description
Pteropus alecto pal-mir-382 precursor miRNA


Sequence

GAAGUUGUUCGUGGUGGAUUCGcuuuacuuaugacgAAUCAUUCACGGACAACACUUU
...(((((((((((..(((((((.........).))))))..))))))))))).....

Structure
--GAA           UG      - uuu 
     GUUGUUCGUGG  GAUUCG c   a
     |||||||||||  |||||| |   c
     CAACAGGCACU  CUAAgc g   u
UUUCA           UA      a uau 


Annotation confidence Not enough data
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Genome context
KB031153.1: 22096793-22096850 [+]
Clustered miRNAs
11 other miRNAs are < 10 kb from pal-mir-382
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pal-miR-382-5p

Accession MIMAT0039915
Description Pteropus alecto pal-miR-382-5p mature miRNA
Sequence 1 - GAAGUUGUUCGUGGUGGAUUCG - 22
Evidence experimental
Illumina [1]

Mature pal-miR-382-3p

Accession MIMAT0039916
Description Pteropus alecto pal-miR-382-3p mature miRNA
Sequence 37 - AAUCAUUCACGGACAACACUUU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682