miRBase entry: pal-mir-9987

Stem-loop pal-mir-9987


Accession
MI0032417
Description
Pteropus alecto pal-mir-9987 precursor miRNA


Sequence

ACCUCGUACCUGAACACCACGcuuguuuguucacggucacgUGCUGCUCAGGGACGGGGCGA
.((((((.(((((.((.((((.((((......))))...)))).)).))))).))))))...

Structure
--A      A     A  C    --c    uu 
   CCUCGU CCUGA CA CACG   uugu  g
   |||||| ||||| || ||||   ||||   
   GGGGCA GGACU GU GUgc   ggca  u
AGC      G     C  C    acu    cu 


Annotation confidence Not enough data
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Genome context
KB030771.1: 14089416-14089477 [-]

Database links

Mature pal-miR-9987-5p

Accession MIMAT0039951
Description Pteropus alecto pal-miR-9987-5p mature miRNA
Sequence 1 - ACCUCGUACCUGAACACCACG - 21
Evidence experimental
Illumina [1]

Mature pal-miR-9987-3p

Accession MIMAT0039952
Description Pteropus alecto pal-miR-9987-3p mature miRNA
Sequence 42 - UGCUGCUCAGGGACGGGGCGA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682