miRBase entry: pal-mir-193b

Stem-loop pal-mir-193b


Accession
MI0032425
Description
Pteropus alecto pal-mir-193b precursor miRNA


Sequence

CGGGGUUUUGAGGGCGAGAUGAguuuauguuuuauccAACUGGCCCACAAAGUCCCGCU
((((((((((.((((.((.((.((.........)).)).)).)))).))))))))))..

Structure
--          A    G  A  A  uua 
  CGGGGUUUUG GGGC AG UG gu   u
  |||||||||| |||| || || ||   g
  GCCCUGAAAC CCCG UC Ac ua   u
UC          A    G  A  c  uuu 


Annotation confidence Not enough data
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Genome context
KB030624.1: 3874021-3874079 [+]

Database links

Mature pal-miR-193b-5p

Accession MIMAT0039967
Description Pteropus alecto pal-miR-193b-5p mature miRNA
Sequence 1 - CGGGGUUUUGAGGGCGAGAUGA - 22
Evidence experimental
Illumina [1]

Mature pal-miR-193b-3p

Accession MIMAT0039968
Description Pteropus alecto pal-miR-193b-3p mature miRNA
Sequence 38 - AACUGGCCCACAAAGUCCCGCU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682