miRBase entry: pal-mir-136

Stem-loop pal-mir-136


Accession
MI0032442
Description
Pteropus alecto pal-mir-136 precursor miRNA


Sequence

ACUCCAUUUGUUUUGAUGAUGGAuucuuacgcucCAUCAUCGUCUCAAAUGAGUCU
((((.(((((...((((((((((.........))))))))))...)))))))))..

Structure
--    C     UUU          uuc 
  ACUC AUUUG   UGAUGAUGGA   u
  |||| |||||   ||||||||||   u
  UGAG UAAAC   GCUACUACcu   a
UC    -     UCU          cgc 


Annotation confidence Not enough data
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Genome context
KB031153.1: 21957296-21957351 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from pal-mir-136
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pal-miR-136-5p

Accession MIMAT0040001
Description Pteropus alecto pal-miR-136-5p mature miRNA
Sequence 1 - ACUCCAUUUGUUUUGAUGAUGGA - 23
Evidence experimental
Illumina [1]

Mature pal-miR-136-3p

Accession MIMAT0040002
Description Pteropus alecto pal-miR-136-3p mature miRNA
Sequence 35 - CAUCAUCGUCUCAAAUGAGUCU - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682