Stem-loop pal-mir-196b

Accession

MI0032446

Description

Pteropus alecto pal-mir-196b precursor miRNA

Sequence

UAGGUAGUUUCCUGUUGUUGGGauccaccuuucucUCGACAGCACGACACUGCCUUC
.(((((((.((.(((((((((((..........))))))))))).)).)))))))..

Structure

-U       U  C           ucca 
  AGGUAGU UC UGUUGUUGGGa    c
  ||||||| || |||||||||||     
  UCCGUCA AG ACGACAGCUcu    c
CU       C  C           cuuu 

Annotation confidence Not enough data

Genome context

KB030660.1: 19438688-19438744 [-]

Mature pal-miR-196b-5p

• Accession: MIMAT0040009
• Description: Pteropus alecto pal-miR-196b-5p mature miRNA
• Sequence: 1 - UAGGUAGUUUCCUGUUGUUGGG - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-196b-3p

• Accession: MIMAT0040010
• Description: Pteropus alecto pal-miR-196b-3p mature miRNA
• Sequence: 36 - UCGACAGCACGACACUGCCUUC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682