miRBase entry: pal-mir-497

Stem-loop pal-mir-497


Accession
MI0032482
Description
Pteropus alecto pal-mir-497 precursor miRNA


Sequence

CAGCAGCACACUGUGGUUUGUacggcacuguggccacguccAAACCACACUGUGGUGUUAGAGCGAG
.((((.((((.(((((((((.(((((......)))..)).))))))))).)))).))))........

Structure
-------C    G    C         U  --   ac 
        AGCA CACA UGUGGUUUG ac  ggc  u
        |||| |||| ||||||||| ||  |||   
        UUGU GUGU ACACCAAAc ug  ccg  g
GAGCGAGA    G    C         c  ca   gu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB031076.1: 3032509-3032575 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from pal-mir-497
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pal-miR-497-5p

Accession MIMAT0040077
Description Pteropus alecto pal-miR-497-5p mature miRNA
Sequence 1 - CAGCAGCACACUGUGGUUUGU - 21
Evidence experimental
Illumina [1]

Mature pal-miR-497-3p

Accession MIMAT0040078
Description Pteropus alecto pal-miR-497-3p mature miRNA
Sequence 42 - AAACCACACUGUGGUGUUAGAGCGAG - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682