Stem-loop pal-mir-342

Accession

MI0032486

Description

Pteropus alecto pal-mir-342 precursor miRNA

Sequence

AGGGGUGCUAUCUGUGAUUGAgggacauggcaaacggaauugUCUCACACAGAAAUCGCACCCGU
..((((((..((((((.....((((((.............)))))).))))))....))))))..

Structure

AG      --UA      AUUGA      uggca 
  GGGUGC    UCUGUG     gggaca     a
  ||||||    ||||||     ||||||     a
  CCCACG    AGACAC     CUCUgu     c
UG      CUAA      ----A      uaagg 

Annotation confidence Not enough data

Genome context

KB031153.1: 21347479-21347543 [+]

Mature pal-miR-342-5p

• Accession: MIMAT0040085
• Description: Pteropus alecto pal-miR-342-5p mature miRNA
• Sequence: 1 - AGGGGUGCUAUCUGUGAUUGA - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-342-3p

• Accession: MIMAT0040086
• Description: Pteropus alecto pal-miR-342-3p mature miRNA
• Sequence: 43 - UCUCACACAGAAAUCGCACCCGU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682