miRBase entry: pal-mir-383

Stem-loop pal-mir-383


Accession
MI0032532
Description
Pteropus alecto pal-mir-383 precursor miRNA


Sequence

AGAUCAGAAGGUGAUUGUGGCUuuggguggauauuaaucagCCACAGCACUGCCUGGUCAGA
.((((((..((((.((((((((...(((........)))))))))))))))..))))))...

Structure
--A      AA    A        uug   gga 
   GAUCAG  GGUG UUGUGGCU   ggu   u
   ||||||  |||| ||||||||   |||    
   CUGGUC  UCAC GACACCga   cua   a
AGA      CG    -        ---   auu 


Annotation confidence Not enough data
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Genome context
KB030862.1: 25593774-25593835 [+]

Database links

Mature pal-miR-383-5p

Accession MIMAT0040171
Description Pteropus alecto pal-miR-383-5p mature miRNA
Sequence 1 - AGAUCAGAAGGUGAUUGUGGCU - 22
Evidence experimental
Illumina [1]

Mature pal-miR-383-3p

Accession MIMAT0040172
Description Pteropus alecto pal-miR-383-3p mature miRNA
Sequence 42 - CCACAGCACUGCCUGGUCAGA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682