miRBase entry: pal-mir-6529

Stem-loop pal-mir-6529


Accession
MI0032544
Description
Pteropus alecto pal-mir-6529 precursor miRNA


Sequence

GAGAGAUCAGAGGUGCAGAGUgcguuaauguuaaugaagCCUGUGCCUUUUACCUCUUUAA
(((((...((((((((((.((.(((((....)))))..))))))))))))...)))))...

Structure
---     AUC          A  -g     a 
   GAGAG   AGAGGUGCAG GU  cguua u
   |||||   |||||||||| ||  |||||  
   UUCUC   UUUCCGUGUC Cg  guaau g
AAU     CAU          -  aa     u 


Annotation confidence Not enough data
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Genome context
KB030347.1: 733020-733080 [-]

Database links

Mature pal-miR-6529-5p

Accession MIMAT0040195
Description Pteropus alecto pal-miR-6529-5p mature miRNA
Sequence 1 - GAGAGAUCAGAGGUGCAGAGU - 21
Evidence experimental
Illumina [1]

Mature pal-miR-6529-3p

Accession MIMAT0040196
Description Pteropus alecto pal-miR-6529-3p mature miRNA
Sequence 40 - CCUGUGCCUUUUACCUCUUUAA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682