Stem-loop pal-mir-9997

Accession

MI0032565

Description

Pteropus alecto pal-mir-9997 precursor miRNA

Sequence

CAGAAGAGUAGAUUGAUUGGUcaaaagucaacccuccucCAGUCACCCCUCUACUCCACUGAC
(((..(((((((.(((((((..................)))))))....)))))))..)))..

Structure

--   AA       ---U       Ucaaaagu 
  CAG  GAGUAGA    UGAUUGG        c
  |||  |||||||    |||||||         
  GUC  CUCAUCU    ACUGACc        a
CA   AC       CCCC       uccuccca 

Annotation confidence Not enough data

Genome context

KB030441.1: 3781061-3781123 [-]

Mature pal-miR-9997-5p

• Accession: MIMAT0040234
• Description: Pteropus alecto pal-miR-9997-5p mature miRNA
• Sequence: 1 - CAGAAGAGUAGAUUGAUUGGU - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-9997-3p

• Accession: MIMAT0040235
• Description: Pteropus alecto pal-miR-9997-3p mature miRNA
• Sequence: 40 - CAGUCACCCCUCUACUCCACUGAC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682