miRBase entry: pal-mir-458

Stem-loop pal-mir-458


Accession
MI0032575
Description
Pteropus alecto pal-mir-458 precursor miRNA


Sequence

AGAGCCAUCUACAGAGCUCUAAGaaacagggcuUGGAGCUCUGUAGAUGGCGCUGG
((.((((((((((((((((((((........)))))))))))))))))))).))..

Structure
--  A                    aaa 
  AG GCCAUCUACAGAGCUCUAAG   c
  || ||||||||||||||||||||    
  UC CGGUAGAUGUCUCGAGGUuc   a
GG  G                    ggg 


Annotation confidence Not enough data
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Genome context
KB030947.1: 2478262-2478317 [+]

Database links

Mature pal-miR-458-5p

Accession MIMAT0040253
Description Pteropus alecto pal-miR-458-5p mature miRNA
Sequence 1 - AGAGCCAUCUACAGAGCUCUAAG - 23
Evidence experimental
Illumina [1]

Mature pal-miR-458-3p

Accession MIMAT0040254
Description Pteropus alecto pal-miR-458-3p mature miRNA
Sequence 34 - UGGAGCUCUGUAGAUGGCGCUGG - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682