miRBase entry: pal-mir-1379

Stem-loop pal-mir-1379


Accession
MI0032582
Description
Pteropus alecto pal-mir-1379 precursor miRNA


Sequence

CUCAGGCUCUCAGCCCGAGCCguguucuucagacgggCACGGGCUGCAGCGCCGACGC
....(((.(((((((((.(((.((((.....))))))).))))))).)).))).....

Structure
-CUCA   U  -       A   g    c 
     GGC CU CAGCCCG GCC uguu u
     ||| || ||||||| ||| |||| u
     CCG GA GUCGGGC Cgg gcag c
CGCAG   C  C       A   -    a 


Annotation confidence Not enough data
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Genome context
KB030861.1: 7838332-7838389 [-]

Database links

Mature pal-miR-1379-5p

Accession MIMAT0040267
Description Pteropus alecto pal-miR-1379-5p mature miRNA
Sequence 1 - CUCAGGCUCUCAGCCCGAGCC - 21
Evidence experimental
Illumina [1]

Mature pal-miR-1379-3p

Accession MIMAT0040268
Description Pteropus alecto pal-miR-1379-3p mature miRNA
Sequence 38 - CACGGGCUGCAGCGCCGACGC - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682