miRBase entry: pal-mir-346

Stem-loop pal-mir-346


Accession
MI0032621
Description
Pteropus alecto pal-mir-346 precursor miRNA


Sequence

UGUCUGCCCGCAUGCCUGCCUCUuuguugcucugaaggAGGCAGGGGCUGGGCCUGCAGC
(((..((((((...(((((((((((.........))))))))))).)).))))..)))..

Structure
--   CU    -  AUG           guu 
  UGU  GCCC GC   CCUGCCUCUuu   g
  |||  |||| ||   |||||||||||   c
  ACG  CGGG CG   GGACGGAggaa   u
CG   UC    U  --G           guc 


Annotation confidence Not enough data
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Genome context
KB030800.1: 1005690-1005749 [+]

Database links

Mature pal-miR-346-5p

Accession MIMAT0040341
Description Pteropus alecto pal-miR-346-5p mature miRNA
Sequence 1 - UGUCUGCCCGCAUGCCUGCCUCU - 23
Evidence experimental
Illumina [1]

Mature pal-miR-346-3p

Accession MIMAT0040342
Description Pteropus alecto pal-miR-346-3p mature miRNA
Sequence 39 - AGGCAGGGGCUGGGCCUGCAGC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682