miRBase entry: pal-mir-299b

Stem-loop pal-mir-299b


Accession
MI0032656
Description
Pteropus alecto pal-mir-299b precursor miRNA


Sequence

UUUACCGUCCCACAUACAUacucaaaauGUAUGUGGGACGGUAAACC
(((((((((((((((((((.......)))))))))))))))))))..

Structure
--                   ac 
  UUUACCGUCCCACAUACAU  u
  |||||||||||||||||||  c
  AAAUGGCAGGGUGUAUGua  a
CC                   aa 


Annotation confidence Not enough data
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Genome context
KB031153.1: 22069219-22069265 [-]
Clustered miRNAs
9 other miRNAs are < 10 kb from pal-mir-299b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pal-miR-299b-5p

Accession MIMAT0040408
Description Pteropus alecto pal-miR-299b-5p mature miRNA
Sequence 1 - UUUACCGUCCCACAUACAU - 19
Evidence experimental
Illumina [1]

Mature pal-miR-299b-3p

Accession MIMAT0040409
Description Pteropus alecto pal-miR-299b-3p mature miRNA
Sequence 29 - GUAUGUGGGACGGUAAACC - 47
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682