miRBase entry: hpo-mir-60a

Stem-loop hpo-mir-60a


Accession
MI0032675
Description
Heligmosomoides polygyrus hpo-mir-60a precursor miRNA

Literature search
1 open access papers mention hpo-mir-60a
(2 sentences)

Sequence

AGCUGGAAACUGUCAUAAAAUCcuuuaugagcgaUAUUAUGCACAUUUUCUGGUUCA
.((((((((.((((((((.((((((...))).))).))))).))).))))))))...

Structure
--A        C   -     A   -   u 
   GCUGGAAA UGU CAUAA AUC cuu  
   |||||||| ||| ||||| ||| ||| a
   UGGUCUUU ACA GUAUU Uag gag  
ACU        U   C     A   c   u 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_140682: 2025-2081 [+]

Database links

Mature hpo-miR-60a-5p

Accession MIMAT0040436
Description Heligmosomoides polygyrus hpo-miR-60a-5p mature miRNA
Sequence 1 - AGCUGGAAACUGUCAUAAAAUC - 22
Evidence experimental
Illumina [1]

Mature hpo-miR-60a-3p

Accession MIMAT0040437
Description Heligmosomoides polygyrus hpo-miR-60a-3p mature miRNA
Sequence 35 - UAUUAUGCACAUUUUCUGGUUCA - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488