miRBase entry: hpo-lin-4

Stem-loop hpo-lin-4


Accession
MI0032688
Description
Heligmosomoides polygyrus hpo-lin-4 precursor miRNA

Literature search
1 open access papers mention hpo-lin-4
(1 sentences)

Sequence

UCCCUGAGACCUCAAUUGCGAcugcuuaaagaucGCGAAUUGUGAGCUCAGGAUAC
..((((((..(.(((((((((((......)).)))).))))).)..))))))....

Structure
--UC      AC U     -    -  gc 
    CCUGAG  C CAAUU GCGA cu  u
    ||||||  | ||||| |||| ||   
    GGACUC  G GUUAA CGcu ga  u
CAUA      GA U     G    a  aa 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_9950: 4236-4291 [-]

Database links

Mature hpo-lin-4-5p

Accession MIMAT0040462
Description Heligmosomoides polygyrus hpo-lin-4-5p mature miRNA
Sequence 1 - UCCCUGAGACCUCAAUUGCGA - 21
Evidence experimental
Illumina [1]

Mature hpo-lin-4-3p

Accession MIMAT0040463
Description Heligmosomoides polygyrus hpo-lin-4-3p mature miRNA
Sequence 35 - GCGAAUUGUGAGCUCAGGAUAC - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488