miRBase entry: hpo-mir-60b

Stem-loop hpo-mir-60b


Accession
MI0032711
Description
Heligmosomoides polygyrus hpo-mir-60b precursor miRNA

Literature search
1 open access papers mention hpo-mir-60b
(2 sentences)

Sequence

AACCAGAAUUUGACAUAAAAUCcaauuggcgaUAUUAUGCACAUUUUCUGGCGUA
..((((((..((.(((((.(((........))).)))))..))..))))))....

Structure
--AA      UU  -A     A   caa 
    CCAGAA  UG  CAUAA AUC   u
    ||||||  ||  ||||| |||    
    GGUCUU  AC  GUAUU Uag   u
AUGC      UU  AC     A   cgg 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_50781: 5953-6007 [-]

Database links

Mature hpo-miR-60b-5p

Accession MIMAT0040508
Description Heligmosomoides polygyrus hpo-miR-60b-5p mature miRNA
Sequence 1 - AACCAGAAUUUGACAUAAAAUC - 22
Evidence experimental
Illumina [1]

Mature hpo-miR-60b-3p

Accession MIMAT0040509
Description Heligmosomoides polygyrus hpo-miR-60b-3p mature miRNA
Sequence 33 - UAUUAUGCACAUUUUCUGGCGUA - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488